SNP Detail For rs967616
1.Mapping Information
Human SNP ID rs967616
Human chromosome chr4
Human SNP position 170967071
Pig chromosome chr14
Pig SNP position 20242585
2.Annotation Information
PubMed ID24925725
JournalJ Am Soc Nephrol
Linkwww.ncbi.nlm.nih.gov/pubmed/24925725
StudyLupus nephritis susceptibility Loci in women with systemic lupus erythematosus.
Disease/TraitLupus nephritis in systemic lupus erythematosus
Initial sample588 European ancestry cases, 1,412 European ancestry controls
Replication sampleNA
Region4q33
Chromosome idchr4
Chromosome position170967071
Reported geneLOC100506122
Mapped geneLOC100506107 - LOC100506122
Upstream gene id100506107
Downstream gene id100506122
SNP gene ids
Upstream gene distance223322
Downstream gene distance73531
SNP risk allelers967616-?
SNPsrs967616
Merged0
SNP id current967616
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text(Additive)
Or beta1.45
%95 Ci[1.23-1.69]
PlatformAffymetrix, Illumina [1621689] (imputed)
CNVN
Mapped traitsystemic lupus erythematosus, lupus nephritis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002690, http://www.ebi.ac.uk/efo/EFO_0005761
Study accessionGCST002479