Human SNP ID | rs9674544 |
---|---|
Human chromosome | chr17 |
Human SNP position | 49007349 |
Pig chromosome | chr12 |
Pig SNP position | 25172575 |
PubMed ID | 20195514 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20195514 |
Study | Genome-wide association study reveals multiple loci associated with primary tooth development during infancy. |
Disease/Trait | Primary tooth development (time to first tooth eruption) |
Initial sample | 5,919 European ancestry related individuals |
Replication sample | NA |
Region | 17q21.32 |
Chromosome id | chr17 |
Chromosome position | 49007349 |
Reported gene | IGF2BP1 |
Mapped gene | IGF2BP1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 10642 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9674544-G |
SNPs | rs9674544 |
Merged | 0 |
SNP id current | 9674544 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.46 |
P value | 0.0000008 |
Pvalue mlog | 6.09691001300805 |
P value text | |
Or beta | 0.25 |
%95 Ci | [NR] % variance |
Platform | Illumina [300766] |
CNV | N |
Mapped trait | odontogenesis |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0042476 |
Study accession | GCST000609 |
PubMed ID | 20195514 |
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20195514 |
Study | Genome-wide association study reveals multiple loci associated with primary tooth development during infancy. |
Disease/Trait | Primary tooth development (number of teeth) |
Initial sample | 5,752 European ancestry related individuals |
Replication sample | NA |
Region | 17q21.32 |
Chromosome id | chr17 |
Chromosome position | 49007349 |
Reported gene | IGF2BP1 |
Mapped gene | IGF2BP1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 10642 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9674544-G |
SNPs | rs9674544 |
Merged | 0 |
SNP id current | 9674544 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.46 |
P value | 0.00000002 |
Pvalue mlog | 7.69897000433601 |
P value text | |
Or beta | 0.27 |
%95 Ci | % variance |
Platform | Illumina [300766] |
CNV | N |
Mapped trait | odontogenesis |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0042476 |
Study accession | GCST000610 |