SNP Detail For rs9674544
1.Mapping Information
Human SNP ID rs9674544
Human chromosome chr17
Human SNP position 49007349
Pig chromosome chr12
Pig SNP position 25172575
2.Annotation Information
PubMed ID20195514
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20195514
StudyGenome-wide association study reveals multiple loci associated with primary tooth development during infancy.
Disease/TraitPrimary tooth development (time to first tooth eruption)
Initial sample5,919 European ancestry related individuals
Replication sampleNA
Region17q21.32
Chromosome idchr17
Chromosome position49007349
Reported geneIGF2BP1
Mapped geneIGF2BP1
Upstream gene id
Downstream gene id
SNP gene ids10642
Upstream gene distance
Downstream gene distance
SNP risk allelers9674544-G
SNPsrs9674544
Merged0
SNP id current9674544
Contextintron_variant
Intergenic0
Allele frequency0.46
P value0.0000008
Pvalue mlog6.09691001300805
P value text
Or beta0.25
%95 Ci[NR] % variance
PlatformIllumina [300766]
CNVN
Mapped traitodontogenesis
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0042476
Study accessionGCST000609
PubMed ID20195514
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20195514
StudyGenome-wide association study reveals multiple loci associated with primary tooth development during infancy.
Disease/TraitPrimary tooth development (number of teeth)
Initial sample5,752 European ancestry related individuals
Replication sampleNA
Region17q21.32
Chromosome idchr17
Chromosome position49007349
Reported geneIGF2BP1
Mapped geneIGF2BP1
Upstream gene id
Downstream gene id
SNP gene ids10642
Upstream gene distance
Downstream gene distance
SNP risk allelers9674544-G
SNPsrs9674544
Merged0
SNP id current9674544
Contextintron_variant
Intergenic0
Allele frequency0.46
P value0.00000002
Pvalue mlog7.69897000433601
P value text
Or beta0.27
%95 Ci% variance
PlatformIllumina [300766]
CNVN
Mapped traitodontogenesis
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0042476
Study accessionGCST000610