SNP Detail For rs9662633
1.Mapping Information
Human SNP ID rs9662633
Human chromosome chr1
Human SNP position 3732998
Pig chromosome chr6
Pig SNP position 59965437
2.Annotation Information
PubMed ID22589738
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22589738
StudyGenome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.
Disease/TraitVisceral adipose tissue adjusted for BMI
Initial sample5,560 European ancestry female individuals, 4,997 European ancestry male individuals
Replication sampleNA
Region1p36.32
Chromosome idchr1
Chromosome position3732998
Reported geneTP73
Mapped geneTP73
Upstream gene id
Downstream gene id
SNP gene ids7161
Upstream gene distance
Downstream gene distance
SNP risk allelers9662633-A
SNPsrs9662633
Merged0
SNP id current9662633
Contextsynonymous_variant
Intergenic0
Allele frequency0.05
P value0.000006
Pvalue mlog5.22184874961635
P value text(men)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [2500000] (imputed)
CNVN
Mapped traitvisceral adipose tissue measurement, body mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004765, http://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST001523