SNP Detail For rs9657904
1.Mapping Information
Human SNP ID rs9657904
Human chromosome chr3
Human SNP position 105867870
Pig chromosome chr13
Pig SNP position 162676966
2.Annotation Information
PubMed ID20453840
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20453840
StudyVariants within the immunoregulatory CBLB gene are associated with multiple sclerosis.
Disease/TraitMultiple sclerosis
Initial sample882 Sardinian cases, 872 Sardinian controls
Replication sample1,775 Sardinian cases, 2,005 Sardinian controls
Region3q13.11
Chromosome idchr3
Chromosome position105867870
Reported geneCBLB
Mapped geneCBLB
Upstream gene id
Downstream gene id
SNP gene ids868
Upstream gene distance
Downstream gene distance
SNP risk allelers9657904-T
SNPsrs9657904
Merged0
SNP id current9657904
Contextintron_variant
Intergenic0
Allele frequency0.826
P value0.0000000002
Pvalue mlog9.69897000433601
P value text
Or beta1.4
%95 Ci[1.27-1.57]
PlatformAffymetrix [6607266] (imputed)
CNVN
Mapped traitmultiple sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003885
Study accessionGCST000680