SNP Detail For rs9652490
1.Mapping Information
Human SNP ID rs9652490
Human chromosome chr15
Human SNP position 77671545
Pig chromosome chr7
Pig SNP position 62436562
2.Annotation Information
PubMed ID19182806
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19182806
StudyVariant in the sequence of the LINGO1 gene confers risk of essential tremor.
Disease/TraitEssential tremor
Initial sample452 European ancestry cases, 14,378 European ancestry controls
Replication sample301 European ancestry cases, 1,419 European ancestry controls
Region15q24.3
Chromosome idchr15
Chromosome position77671545
Reported geneLINGO1
Mapped geneLINGO1
Upstream gene id
Downstream gene id
SNP gene ids84894
Upstream gene distance
Downstream gene distance
SNP risk allelers9652490-G
SNPsrs9652490
Merged0
SNP id current9652490
Contextintron_variant
Intergenic0
Allele frequency0.23
P value0.000000001
Pvalue mlog9
P value text
Or beta1.55
%95 Ci[1.35-1.79]
PlatformIllumina [305624]
CNVN
Mapped traitessential tremor
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003108
Study accessionGCST000329