Human SNP ID | rs9652490 |
---|---|
Human chromosome | chr15 |
Human SNP position | 77671545 |
Pig chromosome | chr7 |
Pig SNP position | 62436562 |
PubMed ID | 19182806 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19182806 |
Study | Variant in the sequence of the LINGO1 gene confers risk of essential tremor. |
Disease/Trait | Essential tremor |
Initial sample | 452 European ancestry cases, 14,378 European ancestry controls |
Replication sample | 301 European ancestry cases, 1,419 European ancestry controls |
Region | 15q24.3 |
Chromosome id | chr15 |
Chromosome position | 77671545 |
Reported gene | LINGO1 |
Mapped gene | LINGO1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 84894 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9652490-G |
SNPs | rs9652490 |
Merged | 0 |
SNP id current | 9652490 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.23 |
P value | 0.000000001 |
Pvalue mlog | 9 |
P value text | |
Or beta | 1.55 |
%95 Ci | [1.35-1.79] |
Platform | Illumina [305624] |
CNV | N |
Mapped trait | essential tremor |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003108 |
Study accession | GCST000329 |