Human SNP ID | rs9647570 |
---|---|
Human chromosome | chr5 |
Human SNP position | 167943258 |
Pig chromosome | chr16 |
Pig SNP position | 60537847 |
PubMed ID | 25231870 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25231870 |
Study | Parent-of-origin-specific allelic associations among 106 genomic loci for age at menarche. |
Disease/Trait | Menarche (age at onset) |
Initial sample | Up to 182,413 European ancestry females |
Replication sample | NA |
Region | 5q34 |
Chromosome id | chr5 |
Chromosome position | 167943258 |
Reported gene | TENM2 |
Mapped gene | TENM2, LOC105377709 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 57451, 105377709 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9647570-G |
SNPs | rs9647570 |
Merged | 0 |
SNP id current | 9647570 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.14 |
P value | 0.00000000001 |
Pvalue mlog | 11 |
P value text | |
Or beta | 0.05 |
%95 Ci | [0.036-0.064] unit increase |
Platform | Affymetrix, Illumina [2441815] (imputed) |
CNV | N |
Mapped trait | age at menarche |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004703 |
Study accession | GCST002541 |