SNP Detail For rs9646303
1.Mapping Information
Human SNP ID rs9646303
Human chromosome chr16
Human SNP position 87428363
Pig chromosome chr6
Pig SNP position 1985802
2.Annotation Information
PubMed ID22472876
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/22472876
StudyA mega-analysis of genome-wide association studies for major depressive disorder.
Disease/TraitMajor depressive disorder
Initial sample9,240 European ancestry cases, 9,519 European ancestry controls
Replication sample6,783 European ancestry cases, 50,695 European ancestry controls
Region16q24.2
Chromosome idchr16
Chromosome position87428363
Reported geneMAP1LC3B, ZCCHC14, FBXO31
Mapped geneZCCHC14
Upstream gene id
Downstream gene id
SNP gene ids23174
Upstream gene distance
Downstream gene distance
SNP risk allelers9646303-?
SNPsrs9646303
Merged0
SNP id current9646303
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta
%95 Ci
PlatformAffymetrix, Illumina, Perlegen [~ 1200000] (imputed)
CNVN
Mapped traitunipolar depression
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003761
Study accessionGCST001469