Human SNP ID | rs9646303 |
---|---|
Human chromosome | chr16 |
Human SNP position | 87428363 |
Pig chromosome | chr6 |
Pig SNP position | 1985802 |
PubMed ID | 22472876 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/22472876 |
Study | A mega-analysis of genome-wide association studies for major depressive disorder. |
Disease/Trait | Major depressive disorder |
Initial sample | 9,240 European ancestry cases, 9,519 European ancestry controls |
Replication sample | 6,783 European ancestry cases, 50,695 European ancestry controls |
Region | 16q24.2 |
Chromosome id | chr16 |
Chromosome position | 87428363 |
Reported gene | MAP1LC3B, ZCCHC14, FBXO31 |
Mapped gene | ZCCHC14 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23174 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9646303-? |
SNPs | rs9646303 |
Merged | 0 |
SNP id current | 9646303 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina, Perlegen [~ 1200000] (imputed) |
CNV | N |
Mapped trait | unipolar depression |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003761 |
Study accession | GCST001469 |