SNP Detail For rs964611
1.Mapping Information
Human SNP ID rs964611
Human chromosome chr15
Human SNP position 48305317
Pig chromosome chr1
Pig SNP position 137509640
2.Annotation Information
PubMed ID23934736
JournalGenet Epidemiol
Linkwww.ncbi.nlm.nih.gov/pubmed/23934736
StudyGenome-wide association study of a heart failure related metabolomic profile among African Americans in the Atherosclerosis Risk in Communities (ARIC) study.
Disease/TraitMetabolite levels (Pyroglutamine)
Initial sample1,260 African American individuals
Replication sampleNA
Region15q21.1
Chromosome idchr15
Chromosome position48305317
Reported geneSLC12A1
Mapped geneSLC12A1 - DUT
Upstream gene id6557
Downstream gene id1854
SNP gene ids
Upstream gene distance1239
Downstream gene distance25783
SNP risk allelers964611-A
SNPsrs964611
Merged0
SNP id current964611
Contextdownstream_gene_variant
Intergenic1
Allele frequency
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta0.15
%95 Ci[0.09-0.22] unit decrease
PlatformAffymetrix [~ 2500000] (imputed)
CNVN
Mapped traitpyroglutamine measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005408
Study accessionGCST002118