SNP Detail For rs9637454
1.Mapping Information
Human SNP ID rs9637454
Human chromosome chr3
Human SNP position 178539774
Pig chromosome chr13
Pig SNP position 125921002
2.Annotation Information
PubMed ID25188341
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25188341
StudyGenome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias.
Disease/TraitHippocampal sclerosis
Initial sample310 cases, 2,576 controls
Replication sampleNA
Region3q26.32
Chromosome idchr3
Chromosome position178539774
Reported geneKCNMB2
Mapped geneKCNMB2, KCNMB2-AS1
Upstream gene id
Downstream gene id
SNP gene ids10242, 104797538
Upstream gene distance
Downstream gene distance
SNP risk allelers9637454-A
SNPsrs9637454
Merged0
SNP id current9637454
Contextintron_variant
Intergenic0
Allele frequency0.2791
P value0.00000007
Pvalue mlog7.15490195998574
P value text
Or beta0.5006
%95 Ci[0.32-0.68] unit increase
PlatformAffymetrix, Illumina [NR] (imputed)
CNVN
Mapped traithippocampal sclerosis of aging
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005678
Study accessionGCST002589