Human SNP ID | rs9637454 |
---|---|
Human chromosome | chr3 |
Human SNP position | 178539774 |
Pig chromosome | chr13 |
Pig SNP position | 125921002 |
PubMed ID | 25188341 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25188341 |
Study | Genome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias. |
Disease/Trait | Hippocampal sclerosis |
Initial sample | 310 cases, 2,576 controls |
Replication sample | NA |
Region | 3q26.32 |
Chromosome id | chr3 |
Chromosome position | 178539774 |
Reported gene | KCNMB2 |
Mapped gene | KCNMB2, KCNMB2-AS1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 10242, 104797538 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9637454-A |
SNPs | rs9637454 |
Merged | 0 |
SNP id current | 9637454 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.2791 |
P value | 0.00000007 |
Pvalue mlog | 7.15490195998574 |
P value text | |
Or beta | 0.5006 |
%95 Ci | [0.32-0.68] unit increase |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | hippocampal sclerosis of aging |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005678 |
Study accession | GCST002589 |