SNP Detail For rs959903
1.Mapping Information
Human SNP ID rs959903
Human chromosome chr4
Human SNP position 25808474
Pig chromosome chr8
Pig SNP position 19930288
2.Annotation Information
PubMed ID20708005
JournalGastroenterology
Linkwww.ncbi.nlm.nih.gov/pubmed/20708005
StudyGenome-wide association study identifies variants associated with histologic features of nonalcoholic Fatty liver disease.
Disease/TraitNon-alcoholic fatty liver disease histology (other)
Initial sample236 European ancestry cases
Replication sampleNA
Region4p15.2
Chromosome idchr4
Chromosome position25808474
Reported gene23231
Mapped geneSEL1L3
Upstream gene id
Downstream gene id
SNP gene ids23231
Upstream gene distance
Downstream gene distance
SNP risk allelers959903-A
SNPsrs959903
Merged0
SNP id current959903
Contextintron_variant
Intergenic0
Allele frequency0.29
P value0.000007
Pvalue mlog5.15490195998574
P value text(Ballon TT)
Or beta3.81
%95 Ci[NR] unit increase
PlatformIllumina [324623]
CNVN
Mapped traitnon-alcoholic fatty liver disease, cirrhosis of liver
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003095, http://www.ebi.ac.uk/efo/EFO_0001422
Study accessionGCST000765