Human SNP ID | rs9596905 |
---|---|
Human chromosome | chr13 |
Human SNP position | 54059238 |
Pig chromosome | chr11 |
Pig SNP position | 28355541 |
PubMed ID | 23725790 |
---|---|
Journal | Twin Res Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23725790 |
Study | GWAS of DNA methylation variation within imprinting control regions suggests parent-of-origin association. |
Disease/Trait | DNA methylation (variation) |
Initial sample | 256 European ancestry individuals |
Replication sample | 384 European ancestry individuals |
Region | 13q14.3 |
Chromosome id | chr13 |
Chromosome position | 54059238 |
Reported gene | LINC00458 |
Mapped gene | LINC00558 - LOC105370211 |
Upstream gene id | 100861552 |
Downstream gene id | 105370211 |
SNP gene ids | |
Upstream gene distance | 183119 |
Downstream gene distance | 37865 |
SNP risk allele | rs9596905-A |
SNPs | rs9596905 |
Merged | 0 |
SNP id current | 9596905 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.06 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (IGF2-DMR) |
Or beta | |
%95 Ci | |
Platform | Illumina [515966] |
CNV | N |
Mapped trait | DNA methylation |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0006306 |
Study accession | GCST002058 |