SNP Detail For rs9596219
1.Mapping Information
Human SNP ID rs9596219
Human chromosome chr13
Human SNP position 49989311
Pig chromosome JH118724-1
Pig SNP position 124234
2.Annotation Information
PubMed ID23563607
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23563607
StudyGenome-wide meta-analysis identifies 11 new loci for anthropometric traits and provides insights into genetic architecture.
Disease/TraitHeight
Initial sample8,097 European ancestry tall individuals, 8,099 European ancestry short individuals
Replication sample4,872 European ancestry tall individuals, 4,831 European ancestry short individuals
Region13q14.2
Chromosome idchr13
Chromosome position49989311
Reported geneTRIM13
Mapped geneSPRYD7, DLEU2
Upstream gene id
Downstream gene id
SNP gene ids57213, 8847
Upstream gene distance
Downstream gene distance
SNP risk allelers9596219-T
SNPsrs9596219
Merged0
SNP id current9596219
Contextintron_variant
Intergenic0
Allele frequency0.25
P value0.000000001
Pvalue mlog9
P value text
Or beta1.16
%95 Ci[NR]
PlatformAffymetrix, Illumina [~ 2800000] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST001956