SNP Detail For rs9584669
1.Mapping Information
Human SNP ID rs9584669
Human chromosome chr13
Human SNP position 97711228
Pig chromosome chr11
Pig SNP position 73987878
2.Annotation Information
PubMed ID26488411
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26488411
StudyGenome-Wide Association Study of Peripheral Arterial Disease in a Japanese Population.
Disease/TraitPeripheral artery disease
Initial sample785 Japanese ancestry cases, 3,383 Japanese ancestry controls
Replication sample2,379 Japanese ancestry cases, 16,752 Japanese ancestry controls
Region13q32.2
Chromosome idchr13
Chromosome position97711228
Reported geneIPO5, RAP2A
Mapped geneLOC105370324 - IPO5
Upstream gene id105370324
Downstream gene id3843
SNP gene ids
Upstream gene distance184
Downstream gene distance242410
SNP risk allelers9584669-C
SNPsrs9584669
Merged
SNP id current9584669
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.00000000000007
Pvalue mlog13.1549019599857
P value text
Or beta1.72
%95 Ci[1.52-2.00]
PlatformIllumina [431666]
CNVN
Mapped traitperipheral arterial disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004265
Study accessionGCST003154