Human SNP ID | rs956882 |
---|---|
Human chromosome | chr5 |
Human SNP position | 117539668 |
Pig chromosome | chr2 |
Pig SNP position | 126590855 |
PubMed ID | 26242244 |
---|---|
Journal | Sci Rep |
Link | www.ncbi.nlm.nih.gov/pubmed/26242244 |
Study | Association of chromosome 5q21.3 polymorphisms with the exploratory eye movement dysfunction in schizophrenia. |
Disease/Trait | Exploratory eye movement dysfunction in schizophrenia (cognitive search score) |
Initial sample | 128 Han Chinese ancestry cases |
Replication sample | NA |
Region | 5q23.1 |
Chromosome id | chr5 |
Chromosome position | 117539668 |
Reported gene | LOC728342 |
Mapped gene | LINC00992 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 728342 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs956882-? |
SNPs | rs956882 |
Merged | |
SNP id current | 956882 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 2.952 |
%95 Ci | [1.87-4.03] unit decrease |
Platform | Illumina [498648] |
CNV | N |
Mapped trait | exploratory eye movement measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007700 |
Study accession | GCST003064 |