SNP Detail For rs956882
1.Mapping Information
Human SNP ID rs956882
Human chromosome chr5
Human SNP position 117539668
Pig chromosome chr2
Pig SNP position 126590855
2.Annotation Information
PubMed ID26242244
JournalSci Rep
Linkwww.ncbi.nlm.nih.gov/pubmed/26242244
StudyAssociation of chromosome 5q21.3 polymorphisms with the exploratory eye movement dysfunction in schizophrenia.
Disease/TraitExploratory eye movement dysfunction in schizophrenia (cognitive search score)
Initial sample128 Han Chinese ancestry cases
Replication sampleNA
Region5q23.1
Chromosome idchr5
Chromosome position117539668
Reported geneLOC728342
Mapped geneLINC00992
Upstream gene id
Downstream gene id
SNP gene ids728342
Upstream gene distance
Downstream gene distance
SNP risk allelers956882-?
SNPsrs956882
Merged
SNP id current956882
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta2.952
%95 Ci[1.87-4.03] unit decrease
PlatformIllumina [498648]
CNVN
Mapped traitexploratory eye movement measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007700
Study accessionGCST003064