SNP Detail For rs9557704
1.Mapping Information
Human SNP ID rs9557704
Human chromosome chr13
Human SNP position 101575144
Pig chromosome chr11
Pig SNP position 77433024
2.Annotation Information
PubMed ID23192594
JournalHum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23192594
StudyGene-environment interactions and obesity traits among postmenopausal African-American and Hispanic women in the Women__s Health Initiative SHARe Study.
Disease/TraitWaist-to-hip circumference ratio (interaction)
Initial sample8,203 African American females, 3,484 Hispanic females
Replication sampleNA
Region13q33.1
Chromosome idchr13
Chromosome position101575144
Reported geneITGBL1
Mapped geneITGBL1
Upstream gene id
Downstream gene id
SNP gene ids9358
Upstream gene distance
Downstream gene distance
SNP risk allelers9557704-A
SNPsrs9557704
Merged0
SNP id current9557704
Contextintron_variant
Intergenic0
Allele frequency0.13
P value0.0000002
Pvalue mlog6.69897000433601
P value text(AA, Dietary energy)
Or beta0.04
%95 Ci[0.03-0.06] unit decrease
PlatformAffymetrix [706791]
CNVN
Mapped traitwaist-hip ratio
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004343
Study accessionGCST001754