SNP Detail For rs9546711
1.Mapping Information
Human SNP ID rs9546711
Human chromosome chr13
Human SNP position 84480131
Pig chromosome chr11
Pig SNP position 60674147
2.Annotation Information
PubMed ID21347282
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21347282
StudyGenome-wide association study of coronary heart disease and its risk factors in 8,090 African Americans: the NHLBI CARe Project.
Disease/TraitCoronary heart disease
Initial sample260 African American cases, 5,053 African American controls
Replication sample621 African American cases, 1,629 African American controls
Region13q31.1
Chromosome idchr13
Chromosome position84480131
Reported geneintergenic
Mapped geneLOC105370289, LINC00333
Upstream gene id
Downstream gene id
SNP gene ids105370289, 100874128
Upstream gene distance
Downstream gene distance
SNP risk allelers9546711-A
SNPsrs9546711
Merged0
SNP id current9546711
Contextintergenic_variant
Intergenic0
Allele frequency0.42
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta1.66
%95 Ci[1.35-2.04]
PlatformAffymetrix [~ 2740000] (imputed)
CNVN
Mapped traitcoronary heart disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001645
Study accessionGCST000972