Human SNP ID | rs9546711 |
---|---|
Human chromosome | chr13 |
Human SNP position | 84480131 |
Pig chromosome | chr11 |
Pig SNP position | 60674147 |
PubMed ID | 21347282 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21347282 |
Study | Genome-wide association study of coronary heart disease and its risk factors in 8,090 African Americans: the NHLBI CARe Project. |
Disease/Trait | Coronary heart disease |
Initial sample | 260 African American cases, 5,053 African American controls |
Replication sample | 621 African American cases, 1,629 African American controls |
Region | 13q31.1 |
Chromosome id | chr13 |
Chromosome position | 84480131 |
Reported gene | intergenic |
Mapped gene | LOC105370289, LINC00333 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105370289, 100874128 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9546711-A |
SNPs | rs9546711 |
Merged | 0 |
SNP id current | 9546711 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.42 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 1.66 |
%95 Ci | [1.35-2.04] |
Platform | Affymetrix [~ 2740000] (imputed) |
CNV | N |
Mapped trait | coronary heart disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001645 |
Study accession | GCST000972 |