Human SNP ID | rs9545740 |
---|---|
Human chromosome | chr13 |
Human SNP position | 81501457 |
Pig chromosome | chr11 |
Pig SNP position | 57944604 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 13q31.1 |
Chromosome id | chr13 |
Chromosome position | 81501457 |
Reported gene | intergenic |
Mapped gene | LOC105370282 - LOC105370283 |
Upstream gene id | 105370282 |
Downstream gene id | 105370283 |
SNP gene ids | |
Upstream gene distance | 161649 |
Downstream gene distance | 38461 |
SNP risk allele | rs9545740-A |
SNPs | rs9545740 |
Merged | 0 |
SNP id current | 9545740 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.408 |
P value | 0.0000007 |
Pvalue mlog | 6.15490195998574 |
P value text | (TNF-a ) |
Or beta | 0.03 |
%95 Ci | [NR] pg/mL increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | tumor necrosis factor-alpha measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004684 |
Study accession | GCST001762 |