SNP Detail For rs9545740
1.Mapping Information
Human SNP ID rs9545740
Human chromosome chr13
Human SNP position 81501457
Pig chromosome chr11
Pig SNP position 57944604
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region13q31.1
Chromosome idchr13
Chromosome position81501457
Reported geneintergenic
Mapped geneLOC105370282 - LOC105370283
Upstream gene id105370282
Downstream gene id105370283
SNP gene ids
Upstream gene distance161649
Downstream gene distance38461
SNP risk allelers9545740-A
SNPsrs9545740
Merged0
SNP id current9545740
Contextintergenic_variant
Intergenic1
Allele frequency0.408
P value0.0000007
Pvalue mlog6.15490195998574
P value text(TNF-a )
Or beta0.03
%95 Ci[NR] pg/mL increase
PlatformIllumina [899892]
CNVN
Mapped traittumor necrosis factor-alpha measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004684
Study accessionGCST001762