SNP Detail For rs9523762
1.Mapping Information
Human SNP ID rs9523762
Human chromosome chr13
Human SNP position 92679633
Pig chromosome chr11
Pig SNP position 67871733
2.Annotation Information
PubMed ID19010793
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19010793
StudyGenome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis.
Disease/TraitMultiple sclerosis
Initial sample978 European ancestry cases, 883 European ancestry controls
Replication sampleNA
Region13q31.3
Chromosome idchr13
Chromosome position92679633
Reported geneGPC5
Mapped geneGPC5
Upstream gene id
Downstream gene id
SNP gene ids2262
Upstream gene distance
Downstream gene distance
SNP risk allelers9523762-?
SNPsrs9523762
Merged0
SNP id current9523762
Contextintron_variant
Intergenic0
Allele frequency0.35
P value0.000001
Pvalue mlog6
P value text
Or beta1.36
%95 Ci[NR]
PlatformIllumina [551642]
CNVN
Mapped traitmultiple sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003885
Study accessionGCST000269