SNP Detail For rs9515201
1.Mapping Information
Human SNP ID rs9515201
Human chromosome chr13
Human SNP position 110388451
Pig chromosome chr11
Pig SNP position 84584426
2.Annotation Information
PubMed ID25663218
JournalCirc Cardiovasc Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25663218
StudyMultiethnic genome-wide association study of cerebral white matter hyperintensities on MRI.
Disease/TraitWhite matter hyperintensity burden
Initial sample17,936 European ancestry individuals, 1,943 African American ancestry individuals, 795 Hispanic individuals, 204 Chinese ancestry individuals, 201 Malay ancestry individuals
Replication sampleNA
Region13q34
Chromosome idchr13
Chromosome position110388451
Reported geneCOL4A2
Mapped geneCOL4A2
Upstream gene id
Downstream gene id
SNP gene ids1284
Upstream gene distance
Downstream gene distance
SNP risk allelers9515201-A
SNPsrs9515201
Merged
SNP id current9515201
Contextintron_variant
Intergenic0
Allele frequency0.3
P value0.0000007
Pvalue mlog6.15490195998574
P value text(EA)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [14227402] (imputed)
CNVN
Mapped traitwhite matter hyperintensity measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005665
Study accessionGCST003013