SNP Detail For rs9513373
1.Mapping Information
Human SNP ID rs9513373
Human chromosome chr13
Human SNP position 98214742
Pig chromosome chr11
Pig SNP position 74378292
2.Annotation Information
PubMed ID25187353
JournalNat Commun
Linkwww.ncbi.nlm.nih.gov/pubmed/25187353
StudyClozapine-induced agranulocytosis is associated with rare HLA-DQB1 and HLA-B alleles.
Disease/TraitClozapine-induced agranulocytosis
Initial sample161 European ancestry cases, 1,196 European ancestry clozapine-treated and untreated controls
Replication sampleNA
Region13q32.2
Chromosome idchr13
Chromosome position98214742
Reported geneFARP1, RNF113B, MIR3170
Mapped geneFARP1
Upstream gene id
Downstream gene id
SNP gene ids10160
Upstream gene distance
Downstream gene distance
SNP risk allelers9513373-C
SNPsrs9513373
Merged0
SNP id current9513373
Contextintron_variant
Intergenic0
Allele frequency0.02
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta4.18
%95 Ci[3.55-4.81]
PlatformIllumina [8809853] (imputed)
CNVN
Mapped traitdrug-induced agranulocytosis, response to clozapine
Mapped trait URIhttp://purl.obolibrary.org/obo/HP_0012235, http://purl.obolibrary.org/obo/GO_0097338
Study accessionGCST002595