Human SNP ID | rs9512755 |
---|---|
Human chromosome | chr13 |
Human SNP position | 27584092 |
Pig chromosome | chr11 |
Pig SNP position | 4536233 |
PubMed ID | 24483146 |
---|---|
Journal | BMC Genomics |
Link | www.ncbi.nlm.nih.gov/pubmed/24483146 |
Study | Discovery of genetic biomarkers contributing to variation in drug response of cytidine analogues using human lymphoblastoid cell lines. |
Disease/Trait | Response to cytadine analogues (cytosine arabinoside) |
Initial sample | 60 European ancestry lymphoblastoid cell lines, 54 African American lymphoblastoid cell lines, 60 Han Chinese ancestry lymphoblastoid cell lines |
Replication sample | NA |
Region | 13q12.2 |
Chromosome id | chr13 |
Chromosome position | 27584092 |
Reported gene | LNX2 |
Mapped gene | LNX2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 222484 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9512755-? |
SNPs | rs9512755 |
Merged | 0 |
SNP id current | 9512755 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [1348798] |
CNV | N |
Mapped trait | response to cytosine arabinoside |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005655 |
Study accession | GCST002345 |