Human SNP ID | rs9500927 |
---|---|
Human chromosome | chr6 |
Human SNP position | 32993584 |
Pig chromosome | chr7 |
Pig SNP position | 29537593 |
PubMed ID | 21804548 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21804548 |
Study | Genome-wide association study identifies three new susceptibility loci for adult asthma in the Japanese population. |
Disease/Trait | Asthma |
Initial sample | 1,532 Japanese ancestry cases, 3,304 Japanese ancestry controls |
Replication sample | 5,639 Japanese ancestry cases, 24,608 Japanese ancestry controls |
Region | 6p21.32 |
Chromosome id | chr6 |
Chromosome position | 32993584 |
Reported gene | HLA-DOA |
Mapped gene | BRD2 - HLA-DOA |
Upstream gene id | 6046 |
Downstream gene id | 3111 |
SNP gene ids | |
Upstream gene distance | 12079 |
Downstream gene distance | 10598 |
SNP risk allele | rs9500927-T |
SNPs | rs9500927 |
Merged | 0 |
SNP id current | 9500927 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.26 |
P value | 0.000000004 |
Pvalue mlog | 8.39794000867203 |
P value text | |
Or beta | 1.13 |
%95 Ci | [1.09-1.18] |
Platform | Illumina [458847] |
CNV | N |
Mapped trait | asthma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000270 |
Study accession | GCST001183 |