SNP Detail For rs9500927
1.Mapping Information
Human SNP ID rs9500927
Human chromosome chr6
Human SNP position 32993584
Pig chromosome chr7
Pig SNP position 29537593
2.Annotation Information
PubMed ID21804548
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21804548
StudyGenome-wide association study identifies three new susceptibility loci for adult asthma in the Japanese population.
Disease/TraitAsthma
Initial sample1,532 Japanese ancestry cases, 3,304 Japanese ancestry controls
Replication sample5,639 Japanese ancestry cases, 24,608 Japanese ancestry controls
Region6p21.32
Chromosome idchr6
Chromosome position32993584
Reported geneHLA-DOA
Mapped geneBRD2 - HLA-DOA
Upstream gene id6046
Downstream gene id3111
SNP gene ids
Upstream gene distance12079
Downstream gene distance10598
SNP risk allelers9500927-T
SNPsrs9500927
Merged0
SNP id current9500927
Contextintergenic_variant
Intergenic1
Allele frequency0.26
P value0.000000004
Pvalue mlog8.39794000867203
P value text
Or beta1.13
%95 Ci[1.09-1.18]
PlatformIllumina [458847]
CNVN
Mapped traitasthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000270
Study accessionGCST001183