Human SNP ID | rs9496398 |
---|---|
Human chromosome | chr6 |
Human SNP position | 142501080 |
Pig chromosome | chr1 |
Pig SNP position | 25089344 |
PubMed ID | 21507922 |
---|---|
Journal | Clin Infect Dis |
Link | www.ncbi.nlm.nih.gov/pubmed/21507922 |
Study | Duffy-null-associated low neutrophil counts influence HIV-1 susceptibility in high-risk South African black women. |
Disease/Trait | Neutrophil count |
Initial sample | 115 African ancestry HIV-negative individuals |
Replication sample | NA |
Region | 6q24.2 |
Chromosome id | chr6 |
Chromosome position | 142501080 |
Reported gene | AL161904.1, RP11-440G9.1 |
Mapped gene | ADGRG6 - LOC153910 |
Upstream gene id | 57211 |
Downstream gene id | 153910 |
SNP gene ids | |
Upstream gene distance | 54814 |
Downstream gene distance | 25375 |
SNP risk allele | rs9496398-? |
SNPs | rs9496398 |
Merged | 0 |
SNP id current | 9496398 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [874956] |
CNV | N |
Mapped trait | neutrophil count |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004833 |
Study accession | GCST001059 |