SNP Detail For rs9491696
1.Mapping Information
Human SNP ID rs9491696
Human chromosome chr6
Human SNP position 127131494
Pig chromosome chr1
Pig SNP position 39773816
2.Annotation Information
PubMed ID20935629
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20935629
StudyMeta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution.
Disease/TraitWaist-hip ratio
Initial sampleUp to 77,167 European ancestry individuals
Replication sampleUp to 113,636 European ancestry individuals
Region6q22.33
Chromosome idchr6
Chromosome position127131494
Reported geneRSPO3
Mapped geneLOC105377988, RSPO3
Upstream gene id
Downstream gene id
SNP gene ids105377988, 84870
Upstream gene distance
Downstream gene distance
SNP risk allelers9491696-G
SNPsrs9491696
Merged0
SNP id current9491696
Contextintron_variant
Intergenic0
Allele frequency0.48
P value2E-40
Pvalue mlog39.698970004336
P value text
Or beta0.04
%95 Ci[NR] unit increase
PlatformAffymetrix, Illumina, Perlegen [up to 2850269] (imputed)
CNVN
Mapped traitwaist-hip ratio
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004343
Study accessionGCST000829