SNP Detail For rs9480865
1.Mapping Information
Human SNP ID rs9480865
Human chromosome chr6
Human SNP position 108595370
Pig chromosome chr1
Pig SNP position 83973169
2.Annotation Information
PubMed ID19010793
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19010793
StudyGenome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis.
Disease/TraitNormalized brain volume
Initial sample753 European ancestry cases, 883 European ancestry controls
Replication sampleNA
Region6q21
Chromosome idchr6
Chromosome position108595370
Reported geneFOXO3
Mapped geneFOXO3
Upstream gene id
Downstream gene id
SNP gene ids2309
Upstream gene distance
Downstream gene distance
SNP risk allelers9480865-?
SNPsrs9480865
Merged0
SNP id current9480865
Contextintron_variant
Intergenic0
Allele frequency0.16
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta
%95 Ci[NR]
PlatformIllumina [551642]
CNVN
Mapped traitmultiple sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003885
Study accessionGCST000268