SNP Detail For rs9472155
1.Mapping Information
Human SNP ID rs9472155
Human chromosome chr6
Human SNP position 43929990
Pig chromosome chr7
Pig SNP position 44688956
2.Annotation Information
PubMed ID21757650
JournalCirc Res
Linkwww.ncbi.nlm.nih.gov/pubmed/21757650
StudyIdentification of cis- and trans-acting genetic variants explaining up to half the variation in circulating vascular endothelial growth factor levels.
Disease/TraitVascular endothelial growth factor levels
Initial sample3,527 European ancestry individuals
Replication sample1,727 European ancestry individuals
Region6p21.1
Chromosome idchr6
Chromosome position43929990
Reported geneMGC45491, VEGF
Mapped geneLINC01512
Upstream gene id
Downstream gene id
SNP gene ids100132354
Upstream gene distance
Downstream gene distance
SNP risk allelers9472155-T
SNPsrs9472155
Merged0
SNP id current9472155
Contextintergenic_variant
Intergenic0
Allele frequency0.22
P value2E-26
Pvalue mlog25.698970004336
P value text
Or beta
%95 Ci
PlatformAffymetrix [2540233] (imputed)
CNVN
Mapped traitvascular endothelial growth factor measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004762
Study accessionGCST001155