Human SNP ID | rs947211 |
---|---|
Human chromosome | chr1 |
Human SNP position | 205783537 |
Pig chromosome | chr9 |
Pig SNP position | 72733154 |
PubMed ID | 19915576 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19915576 |
Study | Genome-wide association study identifies common variants at four loci as genetic risk factors for Parkinson__s disease. |
Disease/Trait | Parkinson__s disease |
Initial sample | 988 Japanese ancestry cases, 2,521 Japanese ancestry controls |
Replication sample | 933 Japanese ancestry cases, 15,753 Japanese ancestry controls |
Region | 1q32.1 |
Chromosome id | chr1 |
Chromosome position | 205783537 |
Reported gene | SLC45A3, PARK16, PM20D1, NUCKS1, RAB7L1, SLC41A1 |
Mapped gene | LOC105371702 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105371702 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs947211-? |
SNPs | rs947211 |
Merged | 0 |
SNP id current | 947211 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000000000002 |
Pvalue mlog | 11.698970004336 |
P value text | |
Or beta | 1.3 |
%95 Ci | [1.21-1.39] |
Platform | Illumina [435470] |
CNV | N |
Mapped trait | Parkinson__s disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002508 |
Study accession | GCST000530 |