SNP Detail For rs947211
1.Mapping Information
Human SNP ID rs947211
Human chromosome chr1
Human SNP position 205783537
Pig chromosome chr9
Pig SNP position 72733154
2.Annotation Information
PubMed ID19915576
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19915576
StudyGenome-wide association study identifies common variants at four loci as genetic risk factors for Parkinson__s disease.
Disease/TraitParkinson__s disease
Initial sample988 Japanese ancestry cases, 2,521 Japanese ancestry controls
Replication sample933 Japanese ancestry cases, 15,753 Japanese ancestry controls
Region1q32.1
Chromosome idchr1
Chromosome position205783537
Reported geneSLC45A3, PARK16, PM20D1, NUCKS1, RAB7L1, SLC41A1
Mapped geneLOC105371702
Upstream gene id
Downstream gene id
SNP gene ids105371702
Upstream gene distance
Downstream gene distance
SNP risk allelers947211-?
SNPsrs947211
Merged0
SNP id current947211
Contextintergenic_variant
Intergenic0
Allele frequencyNR
P value0.000000000002
Pvalue mlog11.698970004336
P value text
Or beta1.3
%95 Ci[1.21-1.39]
PlatformIllumina [435470]
CNVN
Mapped traitParkinson__s disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002508
Study accessionGCST000530