Human SNP ID | rs9469099 |
---|---|
Human chromosome | chr6 |
Human SNP position | 32341131 |
Pig chromosome | chr7 |
Pig SNP position | 28326355 |
PubMed ID | 23042114 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23042114 |
Study | Genome-wide association study identifies eight new susceptibility loci for atopic dermatitis in the Japanese population. |
Disease/Trait | Atopic dermatitis |
Initial sample | 1,472 Japanese ancestry cases, 7,971 Japanese ancestry controls |
Replication sample | 1,856 Japanese ancestry cases, 7,021 Japanese ancestry controls |
Region | 6p21.32 |
Chromosome id | chr6 |
Chromosome position | 32341131 |
Reported gene | C6orf10 |
Mapped gene | C6orf10, LOC101929163 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 10665, 101929163 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9469099-G |
SNPs | rs9469099 |
Merged | 0 |
SNP id current | 9469099 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.909 |
P value | 5E-19 |
Pvalue mlog | 18.3010299956639 |
P value text | |
Or beta | 1.61 |
%95 Ci | [1.44-1.80] |
Platform | Illumina [606164] |
CNV | N |
Mapped trait | atopic eczema |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000274 |
Study accession | GCST001709 |