SNP Detail For rs9469099
1.Mapping Information
Human SNP ID rs9469099
Human chromosome chr6
Human SNP position 32341131
Pig chromosome chr7
Pig SNP position 28326355
2.Annotation Information
PubMed ID23042114
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23042114
StudyGenome-wide association study identifies eight new susceptibility loci for atopic dermatitis in the Japanese population.
Disease/TraitAtopic dermatitis
Initial sample1,472 Japanese ancestry cases, 7,971 Japanese ancestry controls
Replication sample1,856 Japanese ancestry cases, 7,021 Japanese ancestry controls
Region6p21.32
Chromosome idchr6
Chromosome position32341131
Reported geneC6orf10
Mapped geneC6orf10, LOC101929163
Upstream gene id
Downstream gene id
SNP gene ids10665, 101929163
Upstream gene distance
Downstream gene distance
SNP risk allelers9469099-G
SNPsrs9469099
Merged0
SNP id current9469099
Contextintron_variant
Intergenic0
Allele frequency0.909
P value5E-19
Pvalue mlog18.3010299956639
P value text
Or beta1.61
%95 Ci[1.44-1.80]
PlatformIllumina [606164]
CNVN
Mapped traitatopic eczema
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000274
Study accessionGCST001709