Human SNP ID | rs946836 |
---|---|
Human chromosome | chr1 |
Human SNP position | 47855549 |
Pig chromosome | chr6 |
Pig SNP position | 151301266 |
PubMed ID | 22425255 |
---|---|
Journal | Neurobiol Aging |
Link | www.ncbi.nlm.nih.gov/pubmed/22425255 |
Study | A genome-wide search for genetic influences and biological pathways related to the brain__s white matter integrity. |
Disease/Trait | White matter integrity |
Initial sample | 535 European ancestry individuals |
Replication sample | NA |
Region | 1p33 |
Chromosome id | chr1 |
Chromosome position | 47855549 |
Reported gene | LOC388630 |
Mapped gene | TRABD2B |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 388630 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs946836-T |
SNPs | rs946836 |
Merged | 0 |
SNP id current | 946836 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.33 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 0.3 |
%95 Ci | [0.17-0.43] unit increase |
Platform | Illumina [542050] |
CNV | N |
Mapped trait | white matter integrity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004641 |
Study accession | GCST001446 |