SNP Detail For rs946836
1.Mapping Information
Human SNP ID rs946836
Human chromosome chr1
Human SNP position 47855549
Pig chromosome chr6
Pig SNP position 151301266
2.Annotation Information
PubMed ID22425255
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/22425255
StudyA genome-wide search for genetic influences and biological pathways related to the brain__s white matter integrity.
Disease/TraitWhite matter integrity
Initial sample535 European ancestry individuals
Replication sampleNA
Region1p33
Chromosome idchr1
Chromosome position47855549
Reported geneLOC388630
Mapped geneTRABD2B
Upstream gene id
Downstream gene id
SNP gene ids388630
Upstream gene distance
Downstream gene distance
SNP risk allelers946836-T
SNPsrs946836
Merged0
SNP id current946836
Contextintron_variant
Intergenic0
Allele frequency0.33
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta0.3
%95 Ci[0.17-0.43] unit increase
PlatformIllumina [542050]
CNVN
Mapped traitwhite matter integrity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004641
Study accessionGCST001446