SNP Detail For rs9457516
1.Mapping Information
Human SNP ID rs9457516
Human chromosome chr6
Human SNP position 158914219
Pig chromosome chr1
Pig SNP position 10214269
2.Annotation Information
PubMed ID25575512
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25575512
StudyEvidence for several independent genetic variants affecting lipoprotein (a) cholesterol levels.
Disease/TraitLipoprotein (a) - cholesterol levels
Initial sample1,376 Old Order Amish individuals
Replication sampleNA
Region6q25.3
Chromosome idchr6
Chromosome position158914219
Reported geneintergenic
Mapped geneC6orf99
Upstream gene id
Downstream gene id
SNP gene ids100130967
Upstream gene distance
Downstream gene distance
SNP risk allelers9457516-?
SNPsrs9457516
Merged0
SNP id current9457516
Contextdownstream_gene_variant
Intergenic0
Allele frequencyNR
P value0.000000006
Pvalue mlog8.22184874961635
P value text
Or beta
%95 Ci
PlatformAffymetrix [~ 2500000] (imputed)
CNVN
Mapped traitlipoprotein A measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006925
Study accessionGCST002746