SNP Detail For rs9450906
1.Mapping Information
Human SNP ID rs9450906
Human chromosome chr6
Human SNP position 88173605
Pig chromosome chr1
Pig SNP position 63281527
2.Annotation Information
PubMed ID24324551
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/24324551
StudyGenome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects.
Disease/TraitPR interval in Tripanosoma cruzi seropositivity
Initial sample580 Brazilian ancestry individuals
Replication sampleNA
Region6q15
Chromosome idchr6
Chromosome position88173605
Reported geneNR
Mapped geneCNR1 - LOC105377883
Upstream gene id1268
Downstream gene id105377883
SNP gene ids
Upstream gene distance6860
Downstream gene distance43713
SNP risk allelers9450906-?
SNPsrs9450906
Merged0
SNP id current9450906
Contextnon_coding_transcript_exon_variant
Intergenic1
Allele frequencyNR
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta
%95 Ci
PlatformAffymetrix [5486770] (imputed)
CNVN
Mapped traitPR interval, Trypanosoma cruzi seropositivity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004462, http://www.ebi.ac.uk/efo/EFO_0005530
Study accessionGCST002279