SNP Detail For rs9437689
1.Mapping Information
Human SNP ID rs9437689
Human chromosome chr1
Human SNP position 95083980
Pig chromosome chr4
Pig SNP position 134077337
2.Annotation Information
PubMed ID22359512
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22359512
StudyGenome-wide association study identifies novel loci associated with circulating phospho- and sphingolipid concentrations.
Disease/TraitPhospholipid levels (plasma)
Initial sample4,034 European ancestry individuals
Replication sampleNA
Region1p21.3
Chromosome idchr1
Chromosome position95083980
Reported geneALG14
Mapped geneALG14 - TMEM56
Upstream gene id199857
Downstream gene id148534
SNP gene ids
Upstream gene distance11016
Downstream gene distance8537
SNP risk allelers9437689-?
SNPsrs9437689
Merged0
SNP id current9437689
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.00000005
Pvalue mlog7.30102999566398
P value text(proportions)
Or beta0.7
%95 Ci[NR] % increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitphospholipid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004639
Study accessionGCST001414