Human SNP ID | rs943466 |
---|---|
Human chromosome | chr6 |
Human SNP position | 33764010 |
Pig chromosome | chr7 |
Pig SNP position | 34633763 |
PubMed ID | 25673413 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673413 |
Study | Genetic studies of body mass index yield new insights for obesity biology. |
Disease/Trait | Body mass index |
Initial sample | up to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals |
Replication sample | up to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828 |
Region | 6p21.31 |
Chromosome id | chr6 |
Chromosome position | 33764010 |
Reported gene | LEMD2 |
Mapped gene | IP6K3 - LEMD2 |
Upstream gene id | 117283 |
Downstream gene id | 221496 |
SNP gene ids | |
Upstream gene distance | 17025 |
Downstream gene distance | 7203 |
SNP risk allele | rs943466-G |
SNPs | rs943466 |
Merged | 0 |
SNP id current | 943466 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.755 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (EA) |
Or beta | 0.016 |
%95 Ci | [0.0088-0.0226] kg/m2 increase |
Platform | Affymetrix, Illumina [2550021] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002783 |
PubMed ID | 25673413 |
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673413 |
Study | Genetic studies of body mass index yield new insights for obesity biology. |
Disease/Trait | Body mass index |
Initial sample | up to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals |
Replication sample | up to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828 |
Region | 6p21.31 |
Chromosome id | chr6 |
Chromosome position | 33764010 |
Reported gene | LEMD2 |
Mapped gene | IP6K3 - LEMD2 |
Upstream gene id | 117283 |
Downstream gene id | 221496 |
SNP gene ids | |
Upstream gene distance | 17025 |
Downstream gene distance | 7203 |
SNP risk allele | rs943466-G |
SNPs | rs943466 |
Merged | 0 |
SNP id current | 943466 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.752 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | 0.015 |
%95 Ci | [0.0083-0.0217] kg/m2 increase |
Platform | Affymetrix, Illumina [2550021] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002783 |