SNP Detail For rs941764
1.Mapping Information
Human SNP ID rs941764
Human chromosome chr14
Human SNP position 91374725
Pig chromosome chr7
Pig SNP position 119579050
2.Annotation Information
PubMed ID23535729
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23535729
StudyLarge-scale genotyping identifies 41 new loci associated with breast cancer risk.
Disease/TraitBreast cancer
Initial sample10,052 European ancestry cases, 12,575 European ancestry controls
Replication sample45,290 European ancestry cases, 41,880 European ancestry controls
Region14q32.11
Chromosome idchr14
Chromosome position91374725
Reported geneCCDC88C
Mapped geneCCDC88C
Upstream gene id
Downstream gene id
SNP gene ids440193
Upstream gene distance
Downstream gene distance
SNP risk allelers941764-G
SNPsrs941764
Merged0
SNP id current941764
Contextintron_variant
Intergenic0
Allele frequency0.34
P value0.0000000004
Pvalue mlog9.39794000867203
P value text
Or beta1.06
%95 Ci[1.04-1.09]
PlatformAffymetrix, Illumina [~ 2600000] (imputed)
CNVN
Mapped traitbreast carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000305
Study accessionGCST001937