Human SNP ID | rs941576 |
---|---|
Human chromosome | chr14 |
Human SNP position | 100839708 |
Pig chromosome | chr7 |
Pig SNP position | 132151274 |
PubMed ID | 19966805 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19966805 |
Study | The imprinted DLK1-MEG3 gene region on chromosome 14q32.2 alters susceptibility to type 1 diabetes. |
Disease/Trait | Type 1 diabetes |
Initial sample | 7,514 European ancestry cases, 9,045 European ancestry controls |
Replication sample | 4,840 European ancestry cases, 2,670 European ancestry controls, 5,766 European ancestry familial triads |
Region | 14q32.2 |
Chromosome id | chr14 |
Chromosome position | 100839708 |
Reported gene | DIO3, DLK1, MEG3, RTL1 |
Mapped gene | MEG3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 55384 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs941576-A |
SNPs | rs941576 |
Merged | 0 |
SNP id current | 941576 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.57 |
P value | 0.0000000001 |
Pvalue mlog | 10 |
P value text | |
Or beta | 1.11 |
%95 Ci | [1.06-1.16] |
Platform | Affymetrix, Illumina [~ 2600000] (imputed) |
CNV | N |
Mapped trait | type I diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001359 |
Study accession | GCST000539 |