SNP Detail For rs941576
1.Mapping Information
Human SNP ID rs941576
Human chromosome chr14
Human SNP position 100839708
Pig chromosome chr7
Pig SNP position 132151274
2.Annotation Information
PubMed ID19966805
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19966805
StudyThe imprinted DLK1-MEG3 gene region on chromosome 14q32.2 alters susceptibility to type 1 diabetes.
Disease/TraitType 1 diabetes
Initial sample7,514 European ancestry cases, 9,045 European ancestry controls
Replication sample4,840 European ancestry cases, 2,670 European ancestry controls, 5,766 European ancestry familial triads
Region14q32.2
Chromosome idchr14
Chromosome position100839708
Reported geneDIO3, DLK1, MEG3, RTL1
Mapped geneMEG3
Upstream gene id
Downstream gene id
SNP gene ids55384
Upstream gene distance
Downstream gene distance
SNP risk allelers941576-A
SNPsrs941576
Merged0
SNP id current941576
Contextintron_variant
Intergenic0
Allele frequency0.57
P value0.0000000001
Pvalue mlog10
P value text
Or beta1.11
%95 Ci[1.06-1.16]
PlatformAffymetrix, Illumina [~ 2600000] (imputed)
CNVN
Mapped traittype I diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001359
Study accessionGCST000539