SNP Detail For rs9397738
1.Mapping Information
Human SNP ID rs9397738
Human chromosome chr6
Human SNP position 154665530
Pig chromosome chr1
Pig SNP position 14212838
2.Annotation Information
PubMed ID22797727
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22797727
StudyMeta-analysis identifies multiple loci associated with kidney function-related traits in east Asian populations.
Disease/TraitRenal function-related traits (eGRFcrea)
Initial sample42,451 East Asian, South Asian, and South East Asian ancestry individuals
Replication sample19,636 East Asian ancestry individuals
Region6q25.2
Chromosome idchr6
Chromosome position154665530
Reported geneCNKSR3, RBM16
Mapped geneRPS4XP8 - SCAF8
Upstream gene id646269
Downstream gene id22828
SNP gene ids
Upstream gene distance88389
Downstream gene distance67848
SNP risk allelers9397738-G
SNPsrs9397738
Merged0
SNP id current9397738
Contextintergenic_variant
Intergenic1
Allele frequency0.22
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta0.0039
%95 Ci[0.0021-0.0057] ml/min/1.73m2 decrease
PlatformAffymetrix, Illumina [2353587] (imputed)
CNVN
Mapped traitrenal system measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004742
Study accessionGCST001607