Human SNP ID | rs9397738 |
---|---|
Human chromosome | chr6 |
Human SNP position | 154665530 |
Pig chromosome | chr1 |
Pig SNP position | 14212838 |
PubMed ID | 22797727 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22797727 |
Study | Meta-analysis identifies multiple loci associated with kidney function-related traits in east Asian populations. |
Disease/Trait | Renal function-related traits (eGRFcrea) |
Initial sample | 42,451 East Asian, South Asian, and South East Asian ancestry individuals |
Replication sample | 19,636 East Asian ancestry individuals |
Region | 6q25.2 |
Chromosome id | chr6 |
Chromosome position | 154665530 |
Reported gene | CNKSR3, RBM16 |
Mapped gene | RPS4XP8 - SCAF8 |
Upstream gene id | 646269 |
Downstream gene id | 22828 |
SNP gene ids | |
Upstream gene distance | 88389 |
Downstream gene distance | 67848 |
SNP risk allele | rs9397738-G |
SNPs | rs9397738 |
Merged | 0 |
SNP id current | 9397738 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.22 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 0.0039 |
%95 Ci | [0.0021-0.0057] ml/min/1.73m2 decrease |
Platform | Affymetrix, Illumina [2353587] (imputed) |
CNV | N |
Mapped trait | renal system measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004742 |
Study accession | GCST001607 |