SNP Detail For rs9390459
1.Mapping Information
Human SNP ID rs9390459
Human chromosome chr6
Human SNP position 147359223
Pig chromosome chr1
Pig SNP position 20564801
2.Annotation Information
PubMed ID20231535
JournalCirculation
Linkwww.ncbi.nlm.nih.gov/pubmed/20231535
StudyNovel associations of multiple genetic loci with plasma levels of factor VII, factor VIII, and von Willebrand factor: The CHARGE (Cohorts for Heart and Aging Research in Genome Epidemiology) Consortium.
Disease/TraitvWF levels
Initial sample17,596 European ancestry individuals
Replication sampleUp to 7,604 European ancestry individuals
Region6q24.3
Chromosome idchr6
Chromosome position147359223
Reported geneSTXBP5
Mapped geneSTXBP5
Upstream gene id
Downstream gene id
SNP gene ids134957
Upstream gene distance
Downstream gene distance
SNP risk allelers9390459-?
SNPsrs9390459
Merged0
SNP id current9390459
Contextsynonymous_variant
Intergenic0
Allele frequencyNR
P value1E-22
Pvalue mlog22
P value text
Or beta4.8
%95 Ci[2.1-7.5] unit decrease
PlatformAffymetrix, Illumina [2742821] (imputed)
CNVN
Mapped traitvon Willebrand factor measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004629
Study accessionGCST000627