SNP Detail For rs9389269
1.Mapping Information
Human SNP ID rs9389269
Human chromosome chr6
Human SNP position 135106021
Pig chromosome chr1
Pig SNP position 32413241
2.Annotation Information
PubMed ID23222517
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/23222517
StudySeventy-five genetic loci influencing the human red blood cell.
Disease/TraitRed blood cell traits
Initial sample62,553 European ancestry individuals, 9,308 South Asian ancestry individuals
Replication sample63,506 European ancestry individuals
Region6q23.3
Chromosome idchr6
Chromosome position135106021
Reported geneHBS1L
Mapped geneHBS1L - LOC105378010
Upstream gene id10767
Downstream gene id105378010
SNP gene ids
Upstream gene distance51123
Downstream gene distance824
SNP risk allelers9389269-T
SNPsrs9389269
Merged0
SNP id current9389269
Contextupstream_gene_variant
Intergenic1
Allele frequency0.72
P value3E-19
Pvalue mlog18.5228787452803
P value text(EA, MCV)
Or beta0.6
%95 Ci[0.55-0.65] unit decrease
PlatformAffymetrix, Illumina, Perlegen [2711806] (imputed)
CNVN
Mapped traitmean corpuscular volume
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004526
Study accessionGCST001765