Human SNP ID | rs9389269 |
---|---|
Human chromosome | chr6 |
Human SNP position | 135106021 |
Pig chromosome | chr1 |
Pig SNP position | 32413241 |
PubMed ID | 23222517 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/23222517 |
Study | Seventy-five genetic loci influencing the human red blood cell. |
Disease/Trait | Red blood cell traits |
Initial sample | 62,553 European ancestry individuals, 9,308 South Asian ancestry individuals |
Replication sample | 63,506 European ancestry individuals |
Region | 6q23.3 |
Chromosome id | chr6 |
Chromosome position | 135106021 |
Reported gene | HBS1L |
Mapped gene | HBS1L - LOC105378010 |
Upstream gene id | 10767 |
Downstream gene id | 105378010 |
SNP gene ids | |
Upstream gene distance | 51123 |
Downstream gene distance | 824 |
SNP risk allele | rs9389269-T |
SNPs | rs9389269 |
Merged | 0 |
SNP id current | 9389269 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.72 |
P value | 3E-19 |
Pvalue mlog | 18.5228787452803 |
P value text | (EA, MCV) |
Or beta | 0.6 |
%95 Ci | [0.55-0.65] unit decrease |
Platform | Affymetrix, Illumina, Perlegen [2711806] (imputed) |
CNV | N |
Mapped trait | mean corpuscular volume |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004526 |
Study accession | GCST001765 |