SNP Detail For rs9380696
1.Mapping Information
Human SNP ID rs9380696
Human chromosome chr6
Human SNP position 37632998
Pig chromosome chr7
Pig SNP position 38109943
2.Annotation Information
PubMed ID24939585
JournalEur J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24939585
StudyGenome-wide association analysis demonstrates the highly polygenic character of age-related hearing impairment.
Disease/TraitAge-related hearing impairment (interaction)
Initial sample1,489 European ancestry individuals
Replication sampleNA
Region5p14.3 x 6p21.2
Chromosome idchr5 x 6
Chromosome position19441626 x 37632998
Reported geneNR x NR
Mapped geneLOC105374670 - CDH18 x MDGA1
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers10520861-? x rs9380696-?
SNPsrs10520861 x rs9380696
Merged
SNP id current
Contextintergenic_variant x 3_prime_UTR_variant
Intergenic
Allele frequencyNR
P value0.000000007
Pvalue mlog8.15490195998574
P value text
Or beta
%95 Ci
PlatformIllumina [629437] (imputed)
CNVN
Mapped traitage-related hearing impairment
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005782
Study accessionGCST002487