Human SNP ID | rs9376090 |
---|---|
Human chromosome | chr6 |
Human SNP position | 135090090 |
Pig chromosome | chr1 |
Pig SNP position | 32432717 |
PubMed ID | 24097068 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24097068 |
Study | Discovery and refinement of loci associated with lipid levels. |
Disease/Trait | Cholesterol, total |
Initial sample | 94,595 European ancestry individuals |
Replication sample | 93,982 European ancestry individuals |
Region | 6q23.3 |
Chromosome id | chr6 |
Chromosome position | 135090090 |
Reported gene | HBS1L |
Mapped gene | HBS1L - LOC105378010 |
Upstream gene id | 10767 |
Downstream gene id | 105378010 |
SNP gene ids | |
Upstream gene distance | 35192 |
Downstream gene distance | 16755 |
SNP risk allele | rs9376090-C |
SNPs | rs9376090 |
Merged | 0 |
SNP id current | 9376090 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.28 |
P value | 0.000000003 |
Pvalue mlog | 8.52287874528033 |
P value text | |
Or beta | 0.025 |
%95 Ci | [NR] unit decrease |
Platform | NR [NR] (imputed) |
CNV | N |
Mapped trait | total cholesterol measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004574 |
Study accession | GCST002221 |