SNP Detail For rs9376090
1.Mapping Information
Human SNP ID rs9376090
Human chromosome chr6
Human SNP position 135090090
Pig chromosome chr1
Pig SNP position 32432717
2.Annotation Information
PubMed ID24097068
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24097068
StudyDiscovery and refinement of loci associated with lipid levels.
Disease/TraitCholesterol, total
Initial sample94,595 European ancestry individuals
Replication sample93,982 European ancestry individuals
Region6q23.3
Chromosome idchr6
Chromosome position135090090
Reported geneHBS1L
Mapped geneHBS1L - LOC105378010
Upstream gene id10767
Downstream gene id105378010
SNP gene ids
Upstream gene distance35192
Downstream gene distance16755
SNP risk allelers9376090-C
SNPsrs9376090
Merged0
SNP id current9376090
Contextintron_variant
Intergenic1
Allele frequency0.28
P value0.000000003
Pvalue mlog8.52287874528033
P value text
Or beta0.025
%95 Ci[NR] unit decrease
PlatformNR [NR] (imputed)
CNVN
Mapped traittotal cholesterol measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004574
Study accessionGCST002221