Human SNP ID | rs9367630 |
---|---|
Human chromosome | chr6 |
Human SNP position | 55283305 |
Pig chromosome | chr7 |
Pig SNP position | 30297592 |
PubMed ID | 20041166 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20041166 |
Study | Common genetic variation and the control of HIV-1 in humans. |
Disease/Trait | HIV-1 control |
Initial sample | 2,362 European ancestry cases |
Replication sample | NA |
Region | 6p12.1 |
Chromosome id | chr6 |
Chromosome position | 55283305 |
Reported gene | HCRTR2 |
Mapped gene | HCRTR2 - GFRAL |
Upstream gene id | 3062 |
Downstream gene id | 389400 |
SNP gene ids | |
Upstream gene distance | 685 |
Downstream gene distance | 44164 |
SNP risk allele | rs9367630-? |
SNPs | rs9367630 |
Merged | 0 |
SNP id current | 9367630 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.0000001 |
Pvalue mlog | 7 |
P value text | (progression) |
Or beta | |
%95 Ci | |
Platform | Illumina [NR] |
CNV | N |
Mapped trait | HIV-1 infection |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000180 |
Study accession | GCST000549 |