SNP Detail For rs9367630
1.Mapping Information
Human SNP ID rs9367630
Human chromosome chr6
Human SNP position 55283305
Pig chromosome chr7
Pig SNP position 30297592
2.Annotation Information
PubMed ID20041166
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20041166
StudyCommon genetic variation and the control of HIV-1 in humans.
Disease/TraitHIV-1 control
Initial sample2,362 European ancestry cases
Replication sampleNA
Region6p12.1
Chromosome idchr6
Chromosome position55283305
Reported geneHCRTR2
Mapped geneHCRTR2 - GFRAL
Upstream gene id3062
Downstream gene id389400
SNP gene ids
Upstream gene distance685
Downstream gene distance44164
SNP risk allelers9367630-?
SNPsrs9367630
Merged0
SNP id current9367630
Contextdownstream_gene_variant
Intergenic1
Allele frequencyNR
P value0.0000001
Pvalue mlog7
P value text(progression)
Or beta
%95 Ci
PlatformIllumina [NR]
CNVN
Mapped traitHIV-1 infection
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000180
Study accessionGCST000549