SNP Detail For rs936094
1.Mapping Information
Human SNP ID rs936094
Human chromosome chr4
Human SNP position 158523162
Pig chromosome chr8
Pig SNP position 49873630
2.Annotation Information
PubMed ID22076464
JournalLeukemia
Linkwww.ncbi.nlm.nih.gov/pubmed/22076464
StudyIdentification of germline susceptibility loci in ETV6-RUNX1-rearranged childhood acute lymphoblastic leukemia.
Disease/TraitAcute lymphoblastic leukemia (childhood)
Initial sample419 European ancestry ETV6-RUNX1 positive cases, 474 European ancestry controls
Replication sample951 European ancestry ETV6-RUNX1 positive cases, 326 European ancestry ETV6-RUNX1 negative cases, 3,061 European ancestry controls
Region4q32.1
Chromosome idchr4
Chromosome position158523162
Reported geneRXFP1
Mapped geneRXFP1
Upstream gene id
Downstream gene id
SNP gene ids59350
Upstream gene distance
Downstream gene distance
SNP risk allelers936094-C
SNPsrs936094
Merged0
SNP id current936094
Contextintron_variant
Intergenic0
Allele frequency0.17
P value0.000001
Pvalue mlog6
P value text(ETV6-RUNX1 positive, Northern European)
Or beta
%95 Ci
PlatformAffymetrix [355750]
CNVN
Mapped traitacute lymphoblastic leukemia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000220
Study accessionGCST001320