SNP Detail For rs9359762
1.Mapping Information
Human SNP ID rs9359762
Human chromosome chr6
Human SNP position 87939728
Pig chromosome chr1
Pig SNP position 63033511
2.Annotation Information
PubMed ID26249676
JournalWorld J Biol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/26249676
StudyGenetic underpinnings of left superior temporal gyrus thickness in patients with schizophrenia.
Disease/TraitLeft superior temporal gyrus thickness (schizophrenia interaction)
Initial sample113 schizophrenia cases, 126 controls
Replication sampleNA
Region6q15
Chromosome idchr6
Chromosome position87939728
Reported geneSPACA1
Mapped geneLOC105377882
Upstream gene id
Downstream gene id
SNP gene ids105377882
Upstream gene distance
Downstream gene distance
SNP risk allelers9359762-T
SNPsrs9359762
Merged
SNP id current9359762
Contextintergenic_variant
Intergenic0
Allele frequency
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta0.265
%95 Ci[NR] unit decrease
PlatformIllumina [1067955] (imputed)
CNVN
Mapped traitschizophrenia, left superior temporal gyrus thickness measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692, http://www.ebi.ac.uk/efo/EFO_0007739
Study accessionGCST003069