Human SNP ID | rs9359762 |
---|---|
Human chromosome | chr6 |
Human SNP position | 87939728 |
Pig chromosome | chr1 |
Pig SNP position | 63033511 |
PubMed ID | 26249676 |
---|---|
Journal | World J Biol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/26249676 |
Study | Genetic underpinnings of left superior temporal gyrus thickness in patients with schizophrenia. |
Disease/Trait | Left superior temporal gyrus thickness (schizophrenia interaction) |
Initial sample | 113 schizophrenia cases, 126 controls |
Replication sample | NA |
Region | 6q15 |
Chromosome id | chr6 |
Chromosome position | 87939728 |
Reported gene | SPACA1 |
Mapped gene | LOC105377882 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105377882 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9359762-T |
SNPs | rs9359762 |
Merged | |
SNP id current | 9359762 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | 0.265 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [1067955] (imputed) |
CNV | N |
Mapped trait | schizophrenia, left superior temporal gyrus thickness measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000692, http://www.ebi.ac.uk/efo/EFO_0007739 |
Study accession | GCST003069 |