SNP Detail For rs9355610
1.Mapping Information
Human SNP ID rs9355610
Human chromosome chr6
Human SNP position 166969587
Pig chromosome chr1
Pig SNP position 3283652
2.Annotation Information
PubMed ID21841780
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21841780
StudyA genome-wide association study identifies two new risk loci for Graves__ disease.
Disease/TraitGraves__ disease
Initial sample1,468 Chinese ancestry cases, 1,490 Chinese ancestry controls
Replication sample3,994 Chinese ancestry cases, 3,510 Chinese ancestry controls
Region6q27
Chromosome idchr6
Chromosome position166969587
Reported geneRNASET2, FGFR1OP
Mapped geneLOC105378120
Upstream gene id
Downstream gene id
SNP gene ids105378120
Upstream gene distance
Downstream gene distance
SNP risk allelers9355610-G
SNPsrs9355610
Merged0
SNP id current9355610
Contextdownstream_gene_variant
Intergenic0
Allele frequency0.47
P value0.0000000007
Pvalue mlog9.15490195998574
P value text
Or beta1.19
%95 Ci[1.13-1.26]
PlatformIllumina [486049]
CNVN
Mapped traitGraves disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004237
Study accessionGCST001200