Human SNP ID | rs9355211 |
---|---|
Human chromosome | chr6 |
Human SNP position | 168415772 |
Pig chromosome | chr1 |
Pig SNP position | 2382901 |
PubMed ID | 25628645 |
---|---|
Journal | Front Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25628645 |
Study | Identification of genetic variants or genes that are associated with Homoharringtonine (HHT) response through a genome-wide association study in human lymphoblastoid cell lines (LCLs). |
Disease/Trait | Response to Homoharringtonine (cytotoxicity) |
Initial sample | 93 African-American ancestry lymphoblastoid cell lines, 91 European ancestry lymphoblastoid cell lines, 94 Han Chinese ancestry lymphoblastoid cell lines |
Replication sample | NA |
Region | 6q27 |
Chromosome id | chr6 |
Chromosome position | 168415772 |
Reported gene | intergenic |
Mapped gene | LOC105378141 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105378141 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9355211-? |
SNPs | rs9355211 |
Merged | 0 |
SNP id current | 9355211 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.0000007 |
Pvalue mlog | 6.15490195998574 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [6750581] (imputed) |
CNV | N |
Mapped trait | response to homoharringtonine, cytotoxicity measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006996, http://www.ebi.ac.uk/efo/EFO_0006952 |
Study accession | GCST002749 |