SNP Detail For rs932425
1.Mapping Information
Human SNP ID rs932425
Human chromosome chr20
Human SNP position 39244967
Pig chromosome chr17
Pig SNP position 47670769
2.Annotation Information
PubMed ID22952603
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/22952603
StudyGenome-wide association study of d-amphetamine response in healthy volunteers identifies putative associations, including cadherin 13 (CDH13).
Disease/TraitResponse to amphetamines
Initial sample1 American Indian ancestry individual, 18 African American individuals, 10 Asian ancestry individuals, 325 European ancestry individuals, 17 Hispanic individuals, 10 individuals
Replication sampleNA
Region20q12
Chromosome idchr20
Chromosome position39244967
Reported geneintergenic
Mapped geneLOC339568 - LOC102724950
Upstream gene id339568
Downstream gene id102724950
SNP gene ids
Upstream gene distance20219
Downstream gene distance410356
SNP risk allelers932425-?
SNPsrs932425
Merged0
SNP id current932425
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text(SF4)
Or beta
%95 Ci
PlatformAffymetrix [5476100] (imputed)
CNVN
Mapped traitresponse to drug
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0042493
Study accessionGCST001651