Human SNP ID | rs932316 |
---|---|
Human chromosome | chr6 |
Human SNP position | 25640972 |
Pig chromosome | chr7 |
Pig SNP position | 21673626 |
PubMed ID | 19084217 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19084217 |
Study | Variants in TF and HFE explain approximately 40% of genetic variation in serum-transferrin levels. |
Disease/Trait | Iron status biomarkers |
Initial sample | 459 European ancestry twin pairs |
Replication sample | NA |
Region | 6p22.2 |
Chromosome id | chr6 |
Chromosome position | 25640972 |
Reported gene | SCGN |
Mapped gene | LRRC16A - SCGN |
Upstream gene id | 55604 |
Downstream gene id | 10590 |
SNP gene ids | |
Upstream gene distance | 20442 |
Downstream gene distance | 11229 |
SNP risk allele | rs932316-? |
SNPs | rs932316 |
Merged | 0 |
SNP id current | 932316 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (transferrin saturation) |
Or beta | |
%95 Ci | |
Platform | Illumina [315887] |
CNV | N |
Mapped trait | iron biomarker measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004461 |
Study accession | GCST000301 |