SNP Detail For rs9321099
1.Mapping Information
Human SNP ID rs9321099
Human chromosome chr6
Human SNP position 127880994
Pig chromosome chr1
Pig SNP position 38958150
2.Annotation Information
PubMed ID26632684
JournalMedicine (Baltimore)
Linkwww.ncbi.nlm.nih.gov/pubmed/26632684
StudyGenome-wide Meta-analysis on the Sense of Smell Among US Older Adults.
Disease/TraitSense of smell
Initial sample6,252 European ancestry individuals
Replication sampleNA
Region6q22.33
Chromosome idchr6
Chromosome position127880994
Reported geneC6orf1
Mapped geneTHEMIS
Upstream gene id
Downstream gene id
SNP gene ids387357
Upstream gene distance
Downstream gene distance
SNP risk allelers9321099-A
SNPsrs9321099
Merged0
SNP id current9321099
Contextintron_variant
Intergenic0
Allele frequency0.09
P value0.000007
Pvalue mlog5.15490195998574
P value text(Ajusted for ApoE)
Or beta0.04
%95 Ci[0.02-0.06] ln(smell score+1) decrease
PlatformAffymetrix, Illumina [2543887] (imputed)
CNVN
Mapped traitsensory perception of smell
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0007608
Study accessionGCST003174
PubMed ID26632684
JournalMedicine (Baltimore)
Linkwww.ncbi.nlm.nih.gov/pubmed/26632684
StudyGenome-wide Meta-analysis on the Sense of Smell Among US Older Adults.
Disease/TraitSense of smell
Initial sample6,252 European ancestry individuals
Replication sampleNA
Region6q22.33
Chromosome idchr6
Chromosome position127880994
Reported geneC6orf1
Mapped geneTHEMIS
Upstream gene id
Downstream gene id
SNP gene ids387357
Upstream gene distance
Downstream gene distance
SNP risk allelers9321099-A
SNPsrs9321099
Merged0
SNP id current9321099
Contextintron_variant
Intergenic0
Allele frequency0.09
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta0.04
%95 Ci[0.020-0.060] ln(smell score+1) decrease
PlatformAffymetrix, Illumina [2543887] (imputed)
CNVN
Mapped traitsensory perception of smell
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0007608
Study accessionGCST003174