Human SNP ID | rs9318552 |
---|---|
Human chromosome | chr13 |
Human SNP position | 78451652 |
Pig chromosome | chr11 |
Pig SNP position | 55141891 |
PubMed ID | 24376456 |
---|---|
Journal | Front Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24376456 |
Study | Gene-alcohol interactions identify several novel blood pressure loci including a promising locus near SLC16A9. |
Disease/Trait | Diastolic blood pressure (alcohol consumption interaction) |
Initial sample | up to 6,882 European ancestry individuals |
Replication sample | NA |
Region | 13q22.3 |
Chromosome id | chr13 |
Chromosome position | 78451652 |
Reported gene | RNF219-AS1 |
Mapped gene | RNF219-AS1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 100874222 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs9318552-T |
SNPs | rs9318552 |
Merged | 0 |
SNP id current | 9318552 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.79 |
P value | 0.00000005 |
Pvalue mlog | 7.30102999566398 |
P value text | (Oz alcohol/week) |
Or beta | 0.389 |
%95 Ci | [0.25-0.53] unit increase |
Platform | Affymetrix [2500000] (imputed) |
CNV | N |
Mapped trait | diastolic blood pressure, alcohol drinking |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006336, http://www.ebi.ac.uk/efo/EFO_0004329 |
Study accession | GCST002309 |