SNP Detail For rs9318552
1.Mapping Information
Human SNP ID rs9318552
Human chromosome chr13
Human SNP position 78451652
Pig chromosome chr11
Pig SNP position 55141891
2.Annotation Information
PubMed ID24376456
JournalFront Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24376456
StudyGene-alcohol interactions identify several novel blood pressure loci including a promising locus near SLC16A9.
Disease/TraitDiastolic blood pressure (alcohol consumption interaction)
Initial sampleup to 6,882 European ancestry individuals
Replication sampleNA
Region13q22.3
Chromosome idchr13
Chromosome position78451652
Reported geneRNF219-AS1
Mapped geneRNF219-AS1
Upstream gene id
Downstream gene id
SNP gene ids100874222
Upstream gene distance
Downstream gene distance
SNP risk allelers9318552-T
SNPsrs9318552
Merged0
SNP id current9318552
Contextintron_variant
Intergenic0
Allele frequency0.79
P value0.00000005
Pvalue mlog7.30102999566398
P value text(Oz alcohol/week)
Or beta0.389
%95 Ci[0.25-0.53] unit increase
PlatformAffymetrix [2500000] (imputed)
CNVN
Mapped traitdiastolic blood pressure, alcohol drinking
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006336, http://www.ebi.ac.uk/efo/EFO_0004329
Study accessionGCST002309