SNP Detail For rs9315762
1.Mapping Information
Human SNP ID rs9315762
Human chromosome chr13
Human SNP position 40167770
Pig chromosome chr11
Pig SNP position 15277102
2.Annotation Information
PubMed ID23509613
JournalAutoimmune Dis
Linkwww.ncbi.nlm.nih.gov/pubmed/23509613
StudyGenome-wide association study of antiphospholipid antibodies.
Disease/TraitPresence of antiphospholipid antibodies
Initial sample183 European ancestry ACL-positive cases, 487 European ancestry ACL-negative controls, 127 European ancestry LAC-positive cases, 581 European ancestry LAC-negative controls, 136 European ancestry Anti-B2GPI-positive cases, 360 European ancestry Anti-B2GPI
Replication sampleNA
Region13q14.11
Chromosome idchr13
Chromosome position40167770
Reported geneFLJ42392
Mapped geneLOC105370172
Upstream gene id
Downstream gene id
SNP gene ids105370172
Upstream gene distance
Downstream gene distance
SNP risk allelers9315762-?
SNPsrs9315762
Merged0
SNP id current9315762
Contextintron_variant
Intergenic0
Allele frequency0.1535
P value0.000007
Pvalue mlog5.15490195998574
P value text(anti-B2 GPI)
Or beta2.255
%95 Ci[NR]
PlatformAffymetrix [906600]
CNVN
Mapped traitantiphospholipid antibody measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005200
Study accessionGCST001872